No. words: 1398; after pruning: 1372


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:649)  637  0.00 0.00 0.00  BE404374Sn31P146B02P129G071F1_076.ab1        1   650 (46)  C BE404374Sn31P146B02P129G071R1_076.ab1   (52)   650     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1  C BE404374Sn31P146B02P129G071R1_076.ab1   702 
   72    BE404374Sn31P146B02P129G071F1_076.ab1    20 
  100  C BE404374Sn31P146B02P129G071R1_076.ab1   603 
  108    BE404374Sn31P146B02P129G071F1_076.ab1    56 
  112  C BE404374Sn31P146B02P129G071R1_076.ab1   591 
  296    BE404374Sn31P146B02P129G071F1_076.ab1   244 
  300  C BE404374Sn31P146B02P129G071R1_076.ab1   403 
  456    BE404374Sn31P146B02P129G071F1_076.ab1   404 
  480  C BE404374Sn31P146B02P129G071R1_076.ab1   223 
  500    BE404374Sn31P146B02P129G071F1_076.ab1   448 
  504  C BE404374Sn31P146B02P129G071R1_076.ab1   199 
  560    BE404374Sn31P146B02P129G071F1_076.ab1   508 
  572  C BE404374Sn31P146B02P129G071R1_076.ab1   131 
  612    BE404374Sn31P146B02P129G071F1_076.ab1   560 
  620  C BE404374Sn31P146B02P129G071R1_076.ab1    83 
  644    BE404374Sn31P146B02P129G071F1_076.ab1   592 
  648  C BE404374Sn31P146B02P129G071R1_076.ab1    55 
  672    BE404374Sn31P146B02P129G071F1_076.ab1   620 
  680  C BE404374Sn31P146B02P129G071R1_076.ab1    23 
  696    BE404374Sn31P146B02P129G071F1_076.ab1   644 
Contig length: old 748, new 748

Contig length: old 748, new 748
New start: 0