No. words: 1198; after pruning: 1130


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.9 (1,1:766)  385  2.78 0.00 0.00  BE404374Ta12P129E01P146A031F1_047.ab1      190   620 (0)  C BE404374Ta12P129E01P146A031R1_047.ab1   (0)   578   148 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  176 nodes

 90 str. conn. components

Path
    1    BE404374Ta12P129E01P146A031F1_047.ab1     1 
  546  C BE404374Ta12P129E01P146A031R1_047.ab1   222 
  556    BE404374Ta12P129E01P146A031F1_047.ab1   556 
  609  C BE404374Ta12P129E01P146A031R1_047.ab1   159 
Contig length: old 767, new 767

Contig length: old 767, new 767
New start: 0 
S Change at: 643; seg lengths: entry 1, contig 1
S Change at: 667; seg lengths: entry 1, contig 1