No. words: 1344; after pruning: 1276


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.3 (1,1:787)  520  1.80 0.00 0.00  BE404374Ta13P129E01P146A031F1_030.ab1       63   618 (0)  C BE404374Ta13P129E01P146A031R1_030.ab1   (0)   726   171 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1    BE404374Ta13P129E01P146A031F1_030.ab1     1 
  108  C BE404374Ta13P129E01P146A031R1_030.ab1   681 
  119    BE404374Ta13P129E01P146A031F1_030.ab1   119 
  444  C BE404374Ta13P129E01P146A031R1_030.ab1   345 
  452    BE404374Ta13P129E01P146A031F1_030.ab1   452 
  547  C BE404374Ta13P129E01P146A031R1_030.ab1   242 
  559    BE404374Ta13P129E01P146A031F1_030.ab1   559 
  612  C BE404374Ta13P129E01P146A031R1_030.ab1   177 
Contig length: old 788, new 788

Contig length: old 788, new 788
New start: 0 
S Change at: 694; seg lengths: entry 1, contig 1