No. words: 1404; after pruning: 1378


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:645)  625  0.15 0.00 0.15  BE404374Ta14P146B02P129G071F1_068.ab1        1   646 (55)  C BE404374Ta14P146B02P129G071R1_068.ab1   (58)   645     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C BE404374Ta14P146B02P129G071R1_068.ab1   703 
   74    BE404374Ta14P146B02P129G071F1_068.ab1    16 
   78  C BE404374Ta14P146B02P129G071R1_068.ab1   626 
  210    BE404374Ta14P146B02P129G071F1_068.ab1   152 
  214  C BE404374Ta14P146B02P129G071R1_068.ab1   490 
  310    BE404374Ta14P146B02P129G071F1_068.ab1   252 
  330  C BE404374Ta14P146B02P129G071R1_068.ab1   374 
  338    BE404374Ta14P146B02P129G071F1_068.ab1   280 
  342  C BE404374Ta14P146B02P129G071R1_068.ab1   362 
  350    BE404374Ta14P146B02P129G071F1_068.ab1   292 
  378  C BE404374Ta14P146B02P129G071R1_068.ab1   326 
  382    BE404374Ta14P146B02P129G071F1_068.ab1   324 
  482  C BE404374Ta14P146B02P129G071R1_068.ab1   222 
  494    BE404374Ta14P146B02P129G071F1_068.ab1   436 
  498  C BE404374Ta14P146B02P129G071R1_068.ab1   206 
  506    BE404374Ta14P146B02P129G071F1_068.ab1   448 
  518  C BE404374Ta14P146B02P129G071R1_068.ab1   186 
  522    BE404374Ta14P146B02P129G071F1_068.ab1   464 
  534  C BE404374Ta14P146B02P129G071R1_068.ab1   170 
  542    BE404374Ta14P146B02P129G071F1_068.ab1   484 
  590  C BE404374Ta14P146B02P129G071R1_068.ab1   114 
  598    BE404374Ta14P146B02P129G071F1_068.ab1   540 
  630  C BE404374Ta14P146B02P129G071R1_068.ab1    74 
  634    BE404374Ta14P146B02P129G071F1_068.ab1   576 
  666  C BE404374Ta14P146B02P129G071R1_068.ab1    38 
  670    BE404374Ta14P146B02P129G071F1_068.ab1   612 
Contig length: old 758, new 759

Contig length: old 759, new 759
New start: 0