No. words: 1397; after pruning: 1371


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.0 (1,1:646)  629  0.00 0.00 0.15  BE404374Ta15P146B02P129G071F1_065.ab1        1   647 (50)  C BE404374Ta15P146B02P129G071R1_065.ab1   (54)   646     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C BE404374Ta15P146B02P129G071R1_065.ab1   700 
   70    BE404374Ta15P146B02P129G071F1_065.ab1    16 
  170  C BE404374Ta15P146B02P129G071R1_065.ab1   531 
  458    BE404374Ta15P146B02P129G071F1_065.ab1   404 
  478  C BE404374Ta15P146B02P129G071R1_065.ab1   223 
  562    BE404374Ta15P146B02P129G071F1_065.ab1   508 
  574  C BE404374Ta15P146B02P129G071R1_065.ab1   127 
  606    BE404374Ta15P146B02P129G071F1_065.ab1   552 
  614  C BE404374Ta15P146B02P129G071R1_065.ab1    87 
  618    BE404374Ta15P146B02P129G071F1_065.ab1   564 
  626  C BE404374Ta15P146B02P129G071R1_065.ab1    75 
  674    BE404374Ta15P146B02P129G071F1_065.ab1   620 
  684  C BE404374Ta15P146B02P129G071R1_065.ab1    18 
  696    BE404374Ta15P146B02P129G071F1_065.ab1   642 
Contig length: old 750, new 751

Contig length: old 751, new 751
New start: 0