No. words: 1301; after pruning: 1275


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.4 (1,1:762)  513  0.56 0.00 0.19  BE404374Ta16P129E01P146A031F1_043.ab1      105   642 (0)  C BE404374Ta16P129E01P146A031R1_043.ab1   (0)   659   123 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1    BE404374Ta16P129E01P146A031F1_043.ab1     1 
  545  C BE404374Ta16P129E01P146A031R1_043.ab1   219 
  549    BE404374Ta16P129E01P146A031F1_043.ab1   549 
  585  C BE404374Ta16P129E01P146A031R1_043.ab1   179 
  589    BE404374Ta16P129E01P146A031F1_043.ab1   589 
  601  C BE404374Ta16P129E01P146A031R1_043.ab1   163 
Contig length: old 763, new 763

Contig length: old 763, new 763
New start: 0