No. words: 1124; after pruning: 1098


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:622)  447  0.00 0.22 0.00  BE404374Ta17P146C02P129G071F1_063.ab1        1   464 (0)  C BE404374Ta17P146C02P129G071R1_063.ab1   (36)   624   160 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BE404374Ta17P146C02P129G071R1_063.ab1   660 
   99    BE404374Ta17P146C02P129G071F1_063.ab1    62 
  103  C BE404374Ta17P146C02P129G071R1_063.ab1   558 
  111    BE404374Ta17P146C02P129G071F1_063.ab1    74 
  115  C BE404374Ta17P146C02P129G071R1_063.ab1   546 
  231    BE404374Ta17P146C02P129G071F1_063.ab1   194 
  291  C BE404374Ta17P146C02P129G071R1_063.ab1   370 
Contig length: old 660, new 660

Contig length: old 660, new 660
New start: 0