No. words: 1254; after pruning: 1228


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.7 (1,1:611)  581  0.00 0.33 0.17  BE404374Ta18P146C02P129G071F1_064.ab1        1   605 (0)  C BE404374Ta18P146C02P129G071R1_064.ab1   (36)   613     8 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BE404374Ta18P146C02P129G071R1_064.ab1   649 
   83    BE404374Ta18P146C02P129G071F1_064.ab1    45 
   87  C BE404374Ta18P146C02P129G071R1_064.ab1   563 
  119    BE404374Ta18P146C02P129G071F1_064.ab1    81 
  131  C BE404374Ta18P146C02P129G071R1_064.ab1   519 
  159    BE404374Ta18P146C02P129G071F1_064.ab1   121 
  183  C BE404374Ta18P146C02P129G071R1_064.ab1   467 
  227    BE404374Ta18P146C02P129G071F1_064.ab1   189 
  407  C BE404374Ta18P146C02P129G071R1_064.ab1   243 
  487    BE404374Ta18P146C02P129G071F1_064.ab1   449 
  495  C BE404374Ta18P146C02P129G071R1_064.ab1   155 
  503    BE404374Ta18P146C02P129G071F1_064.ab1   465 
  507  C BE404374Ta18P146C02P129G071R1_064.ab1   143 
  539    BE404374Ta18P146C02P129G071F1_064.ab1   501 
  567  C BE404374Ta18P146C02P129G071R1_064.ab1    83 
  587    BE404374Ta18P146C02P129G071F1_064.ab1   549 
  595  C BE404374Ta18P146C02P129G071R1_064.ab1    55 
  611    BE404374Ta18P146C02P129G071F1_064.ab1   573 
  638  C BE404374Ta18P146C02P129G071R1_064.ab1    13 
Contig length: old 649, new 650

Contig length: old 650, new 650
New start: 0