No. words: 1171; after pruning: 1089


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.6 (1,1:650)  460  3.46 0.00 0.00  BE404374Ta18P146F02P129G071F1_010.ab1       70   589 (0)  C BE404374Ta18P146F02P129G071R1_010.ab1   (0)   582    63 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  216 nodes

 110 str. conn. components

Path
    1    BE404374Ta18P146F02P129G071F1_010.ab1     1 
  343  C BE404374Ta18P146F02P129G071R1_010.ab1   309 
  353    BE404374Ta18P146F02P129G071F1_010.ab1   353 
  414  C BE404374Ta18P146F02P129G071R1_010.ab1   238 
  434    BE404374Ta18P146F02P129G071F1_010.ab1   434 
  447  C BE404374Ta18P146F02P129G071R1_010.ab1   205 
  455    BE404374Ta18P146F02P129G071F1_010.ab1   455 
  472  C BE404374Ta18P146F02P129G071R1_010.ab1   180 
Contig length: old 651, new 651

Contig length: old 651, new 651
New start: 0 
S Change at: 484; seg lengths: entry 1, contig 1