No. words: 1249; after pruning: 1209


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   14    0.0 8.6 (1,1:661)  556  0.52 0.00 0.00  BE404374Ta19P129E01P146A031F1_024.ab1       26   598 (0)  C BE404374Ta19P129E01P146A031R1_024.ab1   (14)   637    65 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
14       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1    BE404374Ta19P129E01P146A031F1_024.ab1     1 
  502  C BE404374Ta19P129E01P146A031R1_024.ab1   161 
  512    BE404374Ta19P129E01P146A031F1_024.ab1   512 
  544  C BE404374Ta19P129E01P146A031R1_024.ab1   119 
  556    BE404374Ta19P129E01P146A031F1_024.ab1   556 
  568  C BE404374Ta19P129E01P146A031R1_024.ab1    95 
Contig length: old 662, new 662

Contig length: old 662, new 662
New start: 0