No. words: 1383; after pruning: 1343


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.1 (1,1:793)  562  1.02 0.00 0.00  BE404374Ta21P129E01P146A031F1_022.ab1       90   677 (1)  C BE404374Ta21P129E01P146A031R1_022.ab1   (0)   705   118 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1    BE404374Ta21P129E01P146A031F1_022.ab1     1 
  549  C BE404374Ta21P129E01P146A031R1_022.ab1   246 
  559    BE404374Ta21P129E01P146A031F1_022.ab1   559 
  591  C BE404374Ta21P129E01P146A031R1_022.ab1   204 
  599    BE404374Ta21P129E01P146A031F1_022.ab1   599 
  615  C BE404374Ta21P129E01P146A031R1_022.ab1   180 
Contig length: old 794, new 794

Contig length: old 794, new 794
New start: 0