No. words: 1399; after pruning: 1373


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.1 (1,1:649)  633  0.00 0.00 0.15  BE404374Ta21P146B02P129G071F1_091.ab1        1   650 (46)  C BE404374Ta21P146B02P129G071R1_091.ab1   (54)   649     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1  C BE404374Ta21P146B02P129G071R1_091.ab1   703 
   86    BE404374Ta21P146B02P129G071F1_091.ab1    32 
   98  C BE404374Ta21P146B02P129G071R1_091.ab1   606 
  106    BE404374Ta21P146B02P129G071F1_091.ab1    52 
  126  C BE404374Ta21P146B02P129G071R1_091.ab1   578 
  130    BE404374Ta21P146B02P129G071F1_091.ab1    76 
  178  C BE404374Ta21P146B02P129G071R1_091.ab1   526 
  298    BE404374Ta21P146B02P129G071F1_091.ab1   244 
  302  C BE404374Ta21P146B02P129G071R1_091.ab1   402 
  474    BE404374Ta21P146B02P129G071F1_091.ab1   420 
  482  C BE404374Ta21P146B02P129G071R1_091.ab1   222 
  562    BE404374Ta21P146B02P129G071F1_091.ab1   508 
  570  C BE404374Ta21P146B02P129G071R1_091.ab1   134 
  614    BE404374Ta21P146B02P129G071F1_091.ab1   560 
  630  C BE404374Ta21P146B02P129G071R1_091.ab1    74 
  646    BE404374Ta21P146B02P129G071F1_091.ab1   592 
  650  C BE404374Ta21P146B02P129G071R1_091.ab1    54 
  662    BE404374Ta21P146B02P129G071F1_091.ab1   608 
  683  C BE404374Ta21P146B02P129G071R1_091.ab1    22 
  691    BE404374Ta21P146B02P129G071F1_091.ab1   637 
Contig length: old 749, new 750

Contig length: old 750, new 750
New start: 0