No. words: 1195; after pruning: 1110


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.9 (1,1:643)  501  2.72 0.00 0.00  BE404374Ta21P146F02P129G071F1_005.ab1       87   637 (0)  C BE404374Ta21P146F02P129G071R1_005.ab1   (0)   558     8 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1    BE404374Ta21P146F02P129G071F1_005.ab1     1 
  336  C BE404374Ta21P146F02P129G071R1_005.ab1   309 
  346    BE404374Ta21P146F02P129G071F1_005.ab1   346 
  407  C BE404374Ta21P146F02P129G071R1_005.ab1   238 
  447    BE404374Ta21P146F02P129G071F1_005.ab1   447 
  465  C BE404374Ta21P146F02P129G071R1_005.ab1   180 
  469    BE404374Ta21P146F02P129G071F1_005.ab1   469 
  481  C BE404374Ta21P146F02P129G071R1_005.ab1   164 
Contig length: old 644, new 644

Contig length: old 644, new 644
New start: 0 
S Change at: 57; seg lengths: entry 1, contig 1