No. words: 1311; after pruning: 1285


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 7.1 (1,1:607)  578  0.49 0.00 0.33  BE404374Ta22P146C02P129G071F1_060.ab1        2   609 (39)  C BE404374Ta22P146C02P129G071R1_060.ab1   (57)   606     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BE404374Ta22P146C02P129G071R1_060.ab1   663 
   61    BE404374Ta22P146C02P129G071F1_060.ab1     5 
   65  C BE404374Ta22P146C02P129G071R1_060.ab1   599 
   73    BE404374Ta22P146C02P129G071F1_060.ab1    17 
   77  C BE404374Ta22P146C02P129G071R1_060.ab1   587 
   85    BE404374Ta22P146C02P129G071F1_060.ab1    29 
   93  C BE404374Ta22P146C02P129G071R1_060.ab1   571 
   97    BE404374Ta22P146C02P129G071F1_060.ab1    41 
  121  C BE404374Ta22P146C02P129G071R1_060.ab1   543 
  125    BE404374Ta22P146C02P129G071F1_060.ab1    69 
  141  C BE404374Ta22P146C02P129G071R1_060.ab1   523 
  145    BE404374Ta22P146C02P129G071F1_060.ab1    89 
  181  C BE404374Ta22P146C02P129G071R1_060.ab1   483 
  185    BE404374Ta22P146C02P129G071F1_060.ab1   129 
  189  C BE404374Ta22P146C02P129G071R1_060.ab1   475 
  193    BE404374Ta22P146C02P129G071F1_060.ab1   137 
  269  C BE404374Ta22P146C02P129G071R1_060.ab1   395 
  329    BE404374Ta22P146C02P129G071F1_060.ab1   273 
  465  C BE404374Ta22P146C02P129G071R1_060.ab1   199 
  497    BE404374Ta22P146C02P129G071F1_060.ab1   441 
  501  C BE404374Ta22P146C02P129G071R1_060.ab1   163 
  509    BE404374Ta22P146C02P129G071F1_060.ab1   453 
  517  C BE404374Ta22P146C02P129G071R1_060.ab1   147 
  549    BE404374Ta22P146C02P129G071F1_060.ab1   493 
  569  C BE404374Ta22P146C02P129G071R1_060.ab1    95 
  597    BE404374Ta22P146C02P129G071F1_060.ab1   541 
  601  C BE404374Ta22P146C02P129G071R1_060.ab1    63 
  617    BE404374Ta22P146C02P129G071F1_060.ab1   561 
Contig length: old 703, new 704

Contig length: old 704, new 704
New start: 0