No. words: 1400; after pruning: 1374


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:649)  637  0.00 0.00 0.00  BE404374Td02P146B02P129G071F1_080.ab1        1   650 (46)  C BE404374Td02P146B02P129G071R1_080.ab1   (54)   650     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1  C BE404374Td02P146B02P129G071R1_080.ab1   704 
   70    BE404374Td02P146B02P129G071F1_080.ab1    16 
  126  C BE404374Td02P146B02P129G071R1_080.ab1   579 
  130    BE404374Td02P146B02P129G071F1_080.ab1    76 
  138  C BE404374Td02P146B02P129G071R1_080.ab1   567 
  142    BE404374Td02P146B02P129G071F1_080.ab1    88 
  178  C BE404374Td02P146B02P129G071R1_080.ab1   527 
  298    BE404374Td02P146B02P129G071F1_080.ab1   244 
  302  C BE404374Td02P146B02P129G071R1_080.ab1   403 
  410    BE404374Td02P146B02P129G071F1_080.ab1   356 
  418  C BE404374Td02P146B02P129G071R1_080.ab1   287 
  458    BE404374Td02P146B02P129G071F1_080.ab1   404 
  482  C BE404374Td02P146B02P129G071R1_080.ab1   223 
  562    BE404374Td02P146B02P129G071F1_080.ab1   508 
  570  C BE404374Td02P146B02P129G071R1_080.ab1   135 
  674    BE404374Td02P146B02P129G071F1_080.ab1   620 
  682  C BE404374Td02P146B02P129G071R1_080.ab1    23 
  690    BE404374Td02P146B02P129G071F1_080.ab1   636 
  694  C BE404374Td02P146B02P129G071R1_080.ab1    11 
  698    BE404374Td02P146B02P129G071F1_080.ab1   644 
Contig length: old 750, new 750

Contig length: old 750, new 750
New start: 0