No. words: 1384; after pruning: 1358


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.0 (1,1:635)  618  0.16 0.00 0.00  BE404374Td05P146B02P129G071F1_075.ab1        1   636 (72)  C BE404374Td05P146B02P129G071R1_075.ab1   (40)   636     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C BE404374Td05P146B02P129G071R1_075.ab1   676 
   76    BE404374Td05P146B02P129G071F1_075.ab1    36 
  124  C BE404374Td05P146B02P129G071R1_075.ab1   553 
  128    BE404374Td05P146B02P129G071F1_075.ab1    88 
  136  C BE404374Td05P146B02P129G071R1_075.ab1   541 
  140    BE404374Td05P146B02P129G071F1_075.ab1   100 
  168  C BE404374Td05P146B02P129G071R1_075.ab1   509 
  296    BE404374Td05P146B02P129G071F1_075.ab1   256 
  300  C BE404374Td05P146B02P129G071R1_075.ab1   377 
  456    BE404374Td05P146B02P129G071F1_075.ab1   416 
  480  C BE404374Td05P146B02P129G071R1_075.ab1   197 
  560    BE404374Td05P146B02P129G071F1_075.ab1   520 
  572  C BE404374Td05P146B02P129G071R1_075.ab1   105 
  612    BE404374Td05P146B02P129G071F1_075.ab1   572 
  616  C BE404374Td05P146B02P129G071R1_075.ab1    61 
  620    BE404374Td05P146B02P129G071F1_075.ab1   580 
  624  C BE404374Td05P146B02P129G071R1_075.ab1    53 
  644    BE404374Td05P146B02P129G071F1_075.ab1   604 
  648  C BE404374Td05P146B02P129G071R1_075.ab1    29 
  668    BE404374Td05P146B02P129G071F1_075.ab1   628 
Contig length: old 748, new 748

Contig length: old 748, new 748
New start: 0