No. words: 1160; after pruning: 1134


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.4 (1,1:606)  482  1.17 0.19 0.00  BE404374Td07P146C02P129G071F1_041.ab1        2   516 (0)  C BE404374Td07P146C02P129G071R1_041.ab1   (37)   607    92 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C BE404374Td07P146C02P129G071R1_041.ab1   644 
   49    BE404374Td07P146C02P129G071F1_041.ab1    12 
   53  C BE404374Td07P146C02P129G071R1_041.ab1   592 
   61    BE404374Td07P146C02P129G071F1_041.ab1    24 
   69  C BE404374Td07P146C02P129G071R1_041.ab1   576 
   73    BE404374Td07P146C02P129G071F1_041.ab1    36 
  109  C BE404374Td07P146C02P129G071R1_041.ab1   536 
  113    BE404374Td07P146C02P129G071F1_041.ab1    76 
  117  C BE404374Td07P146C02P129G071R1_041.ab1   528 
  125    BE404374Td07P146C02P129G071F1_041.ab1    88 
  129  C BE404374Td07P146C02P129G071R1_041.ab1   516 
  137    BE404374Td07P146C02P129G071F1_041.ab1   100 
  161  C BE404374Td07P146C02P129G071R1_041.ab1   484 
  177    BE404374Td07P146C02P129G071F1_041.ab1   140 
  261  C BE404374Td07P146C02P129G071R1_041.ab1   384 
  313    BE404374Td07P146C02P129G071F1_041.ab1   276 
  321  C BE404374Td07P146C02P129G071R1_041.ab1   324 
  329    BE404374Td07P146C02P129G071F1_041.ab1   292 
  337  C BE404374Td07P146C02P129G071R1_041.ab1   308 
Contig length: old 644, new 644

Contig length: old 644, new 644
New start: 0