No. words: 1072; after pruning: 1046


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 7.9 (1,1:625)  414  1.13 0.00 0.00  BE404374Td08P146C02P129G071F1_042.ab1       20   461 (0)  C BE404374Td08P146C02P129G071R1_042.ab1   (4)   607   166 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1    BE404374Td08P146C02P129G071F1_042.ab1     1 
  228  C BE404374Td08P146C02P129G071R1_042.ab1   399 
  232    BE404374Td08P146C02P129G071F1_042.ab1   232 
  248  C BE404374Td08P146C02P129G071R1_042.ab1   379 
  328    BE404374Td08P146C02P129G071F1_042.ab1   328 
  332  C BE404374Td08P146C02P129G071R1_042.ab1   295 
Contig length: old 626, new 626

Contig length: old 626, new 626
New start: 0