No. words: 1090; after pruning: 1064


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.5 (1,1:606)  426  0.67 0.00 0.00  BE404374Td09P146C02P129G071F1_039.ab1        1   448 (0)  C BE404374Td09P146C02P129G071R1_039.ab1   (35)   607   160 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  218 nodes

 111 str. conn. components

Path
    1  C BE404374Td09P146C02P129G071R1_039.ab1   642 
   40    BE404374Td09P146C02P129G071F1_039.ab1     5 
  178  C BE404374Td09P146C02P129G071R1_039.ab1   465 
  182    BE404374Td09P146C02P129G071F1_039.ab1   147 
  230  C BE404374Td09P146C02P129G071R1_039.ab1   413 
  242    BE404374Td09P146C02P129G071F1_039.ab1   207 
  266  C BE404374Td09P146C02P129G071R1_039.ab1   377 
Contig length: old 642, new 642

Contig length: old 642, new 642
New start: 0