No. words: 1233; after pruning: 1207


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:614)  551  1.02 0.34 0.00  BE404374Td10P146C02P129G071F1_040.ab1        1   590 (0)  C BE404374Td10P146C02P129G071R1_040.ab1   (27)   616    25 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1  C BE404374Td10P146C02P129G071R1_040.ab1   643 
   48    BE404374Td10P146C02P129G071F1_040.ab1    19 
  129  C BE404374Td10P146C02P129G071R1_040.ab1   515 
  133    BE404374Td10P146C02P129G071F1_040.ab1   104 
  273  C BE404374Td10P146C02P129G071R1_040.ab1   371 
Contig length: old 643, new 643

Contig length: old 643, new 643
New start: 0