No. words: 1487; after pruning: 1461


Histogram of relative pair offsets, for read pairs with multiple alignments:
55     4
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.3 (1,1:1169)  295  1.26 0.00 0.00  BE404580As01P016D01D07R1_040.ab1      348   664 (0)  C BE404580As01P016D01D07F1_040.ab1   (0)   823   507 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  148 nodes

 76 str. conn. components

Path
    1    BE404580As01P016D01D07R1_040.ab1     1 
  533  C BE404580As01P016D01D07F1_040.ab1   638 
  545    BE404580As01P016D01D07R1_040.ab1   545 
  549  C BE404580As01P016D01D07F1_040.ab1   622 
  557    BE404580As01P016D01D07R1_040.ab1   557 
  565  C BE404580As01P016D01D07F1_040.ab1   606 
  569    BE404580As01P016D01D07R1_040.ab1   569 
  581  C BE404580As01P016D01D07F1_040.ab1   590 
  599    BE404580As01P016D01D07R1_040.ab1   599 
  603  C BE404580As01P016D01D07F1_040.ab1   568 
Contig length: old 1170, new 1170

Contig length: old 1170, new 1170
New start: 0 
S Change at: 656; seg lengths: entry 1, contig 1