No. words: 1653; after pruning: 1627


Histogram of relative pair offsets, for read pairs with multiple alignments:
55     4
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.9 (1,1:1189)  450  0.22 0.00 0.00  BE404580As02P016D01D07R1_038.ab1      391   853 (0)  C BE404580As02P016D01D07F1_038.ab1   (0)   800   338 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1    BE404580As02P016D01D07R1_038.ab1     1 
  558  C BE404580As02P016D01D07F1_038.ab1   633 
  562    BE404580As02P016D01D07R1_038.ab1   562 
  586  C BE404580As02P016D01D07F1_038.ab1   605 
Contig length: old 1190, new 1190

Contig length: old 1190, new 1190
New start: 0