No. words: 1528; after pruning: 1502


Histogram of relative pair offsets, for read pairs with multiple alignments:
55     4
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.5 (1,1:1008)  503  0.00 0.00 0.00  BE404580At01P016D01D07R1_036.ab1      229   747 (0)  C BE404580At01P016D01D07F1_036.ab1   (0)   781   263 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  256 nodes

 130 str. conn. components

Path
    1    BE404580At01P016D01D07R1_036.ab1     1 
  386  C BE404580At01P016D01D07F1_036.ab1   624 
  394    BE404580At01P016D01D07R1_036.ab1   394 
  422  C BE404580At01P016D01D07F1_036.ab1   588 
Contig length: old 1009, new 1009

Contig length: old 1009, new 1009
New start: 0