No. words: 1444; after pruning: 1418


Histogram of relative pair offsets, for read pairs with multiple alignments:
55     4
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.0 (1,1:994)  435  0.00 0.00 0.00  BE404580At02P016D01D07R1_034.ab1      220   668 (0)  C BE404580At02P016D01D07F1_034.ab1   (0)   776   328 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1    BE404580At02P016D01D07R1_034.ab1     1 
  376  C BE404580At02P016D01D07F1_034.ab1   620 
  388    BE404580At02P016D01D07R1_034.ab1   388 
  396  C BE404580At02P016D01D07F1_034.ab1   600 
Contig length: old 995, new 995

Contig length: old 995, new 995
New start: 0