No. words: 1356; after pruning: 1330


Histogram of relative pair offsets, for read pairs with multiple alignments:
55     4
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.5 (1,1:1012)  324  0.29 0.00 0.00  BE404580Ld03P016D01D07R1_059.ab1      287   629 (0)  C BE404580Ld03P016D01D07F1_059.ab1   (0)   727   385 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  166 nodes

 85 str. conn. components

Path
    1    BE404580Ld03P016D01D07R1_059.ab1     1 
  422  C BE404580Ld03P016D01D07F1_059.ab1   592 
  438    BE404580Ld03P016D01D07R1_059.ab1   438 
  454  C BE404580Ld03P016D01D07F1_059.ab1   560 
  466    BE404580Ld03P016D01D07R1_059.ab1   466 
  474  C BE404580Ld03P016D01D07F1_059.ab1   540 
  478    BE404580Ld03P016D01D07R1_059.ab1   478 
  482  C BE404580Ld03P016D01D07F1_059.ab1   532 
  490    BE404580Ld03P016D01D07R1_059.ab1   490 
  498  C BE404580Ld03P016D01D07F1_059.ab1   516 
Contig length: old 1013, new 1013

Contig length: old 1013, new 1013
New start: 0