No. words: 1352; after pruning: 1326


Histogram of relative pair offsets, for read pairs with multiple alignments:
54     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 5.5 (1,1:1006)  298  2.05 0.29 0.29  BE404580Ld06P016D01D07R1_053.ab1      219   559 (0)  C BE404580Ld06P016D01D07F1_053.ab1   (3)   790   450 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  138 nodes

 71 str. conn. components

Path
    1    BE404580Ld06P016D01D07R1_053.ab1     1 
  232  C BE404580Ld06P016D01D07F1_053.ab1   777 
  250    BE404580Ld06P016D01D07R1_053.ab1   250 
  262  C BE404580Ld06P016D01D07F1_053.ab1   747 
  266    BE404580Ld06P016D01D07R1_053.ab1   266 
  282  C BE404580Ld06P016D01D07F1_053.ab1   727 
  308    BE404580Ld06P016D01D07R1_053.ab1   307 
  312  C BE404580Ld06P016D01D07F1_053.ab1   697 
  324    BE404580Ld06P016D01D07R1_053.ab1   323 
  332  C BE404580Ld06P016D01D07F1_053.ab1   677 
Contig length: old 1007, new 1008

Contig length: old 1008, new 1008
New start: 0 
S Change at: 223; seg lengths: entry 6, contig 6