No. words: 1415; after pruning: 1389


Histogram of relative pair offsets, for read pairs with multiple alignments:
55     4
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.3 (1,1:1010)  369  0.99 0.25 0.00  BE404580Ld10P016D01D07R1_062.ab1      245   647 (0)  C BE404580Ld10P016D01D07F1_062.ab1   (0)   768   365 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1    BE404580Ld10P016D01D07R1_062.ab1     1 
  359  C BE404580Ld10P016D01D07F1_062.ab1   653 
  367    BE404580Ld10P016D01D07R1_062.ab1   367 
  399  C BE404580Ld10P016D01D07F1_062.ab1   613 
  407    BE404580Ld10P016D01D07R1_062.ab1   407 
  419  C BE404580Ld10P016D01D07F1_062.ab1   593 
  427    BE404580Ld10P016D01D07R1_062.ab1   427 
  431  C BE404580Ld10P016D01D07F1_062.ab1   581 
Contig length: old 1011, new 1011

Contig length: old 1011, new 1011
New start: 0