No. words: 2406; after pruning: 2354


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    
Merge:(0)    0    0.0 1.7 (1,1:440)  412  0.45 0.23 0.68  BE405208Ld07P078A01P078A071F1_033.ab1        1   442 (143)  C BE405208Ld07P078A01P078A071R1_049.ab1   (177)   440     1 *

Pass: 1
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.9 (2,1:439)  602  0.32 0.00 0.16  BE405208Ld07P078A01P078A071R1_049.ab1        1   617 (0)    BE405208Ld07P078A01P078A071R1_033.ab1        1   616 (2) *
Merge:(0)    0    0.0 7.6 (3,1:0)  579  0.17 0.00 0.00  BE405208Ld07P078A01P078A071F1_033.ab1        1   585 (0)    BE405208Ld07P078A01P078A071F1_049.ab1        1   585 (1) *

Pass: 3
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       2        0

Offset
  0       5 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    4    1

Chimera merges: 


Contig 1:  1392 nodes

 381 str. conn. components

Path
    1  C BE405208Ld07P078A01P078A071R1_033.ab1   618 
   12  C BE405208Ld07P078A01P078A071R1_049.ab1   608 
   24  C BE405208Ld07P078A01P078A071R1_033.ab1   595 
   48  C BE405208Ld07P078A01P078A071R1_049.ab1   572 
   60  C BE405208Ld07P078A01P078A071R1_033.ab1   559 
   68  C BE405208Ld07P078A01P078A071R1_049.ab1   552 
  120  C BE405208Ld07P078A01P078A071R1_033.ab1   499 
  132  C BE405208Ld07P078A01P078A071R1_049.ab1   488 
  176  C BE405208Ld07P078A01P078A071R1_033.ab1   443 
  404    BE405208Ld07P078A01P078A071F1_049.ab1   225 
  652    BE405208Ld07P078A01P078A071F1_033.ab1   473 
  712    BE405208Ld07P078A01P078A071F1_049.ab1   533 
  736    BE405208Ld07P078A01P078A071F1_033.ab1   557 
  760    BE405208Ld07P078A01P078A071F1_049.ab1   581 
Contig length: old 764, new 765

Contig length: old 765, new 765
New start: 0