No. words: 1154; after pruning: 1128


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 6.4 (1,1:448)  419  0.00 0.23 0.23  BE405221Ld05P003A04A10F1_010.ab1        2   443 (150)  C BE405221Ld05P003A04A10R1_010.ab1   (113)   448     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  216 nodes

 110 str. conn. components

Path
    1  C BE405221Ld05P003A04A10R1_010.ab1   561 
  160    BE405221Ld05P003A04A10F1_010.ab1    47 
  168  C BE405221Ld05P003A04A10R1_010.ab1   394 
  172    BE405221Ld05P003A04A10F1_010.ab1    59 
  176  C BE405221Ld05P003A04A10R1_010.ab1   386 
  184    BE405221Ld05P003A04A10F1_010.ab1    71 
  224  C BE405221Ld05P003A04A10R1_010.ab1   338 
  320    BE405221Ld05P003A04A10F1_010.ab1   207 
  352  C BE405221Ld05P003A04A10R1_010.ab1   210 
  388    BE405221Ld05P003A04A10F1_010.ab1   275 
  404  C BE405221Ld05P003A04A10R1_010.ab1   158 
  424    BE405221Ld05P003A04A10F1_010.ab1   311 
  432  C BE405221Ld05P003A04A10R1_010.ab1   130 
  436    BE405221Ld05P003A04A10F1_010.ab1   323 
  480  C BE405221Ld05P003A04A10R1_010.ab1    82 
  488    BE405221Ld05P003A04A10F1_010.ab1   375 
  500  C BE405221Ld05P003A04A10R1_010.ab1    62 
  504    BE405221Ld05P003A04A10F1_010.ab1   391 
Contig length: old 705, new 706

Contig length: old 706, new 706
New start: 0