No. words: 1148; after pruning: 1122


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 11.3 (1,1:527)  519  0.00 0.00 0.00  BE405260As01P016F01F07R1_072.ab1        3   528 (50)  C BE405260As01P016F01F07F1_072.ab1   (44)   526     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  262 nodes

 133 str. conn. components

Path
    1  C BE405260As01P016F01F07F1_072.ab1   570 
  124    BE405260As01P016F01F07R1_072.ab1    82 
  128  C BE405260As01P016F01F07F1_072.ab1   443 
  396    BE405260As01P016F01F07R1_072.ab1   354 
  488  C BE405260As01P016F01F07F1_072.ab1    83 
  536    BE405260As01P016F01F07R1_072.ab1   494 
Contig length: old 620, new 620

Contig length: old 620, new 620
New start: 0