No. words: 1144; after pruning: 1118


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.6 (1,1:522)  514  0.00 0.00 0.00  BE405260At02P016F01F07R1_066.ab1        1   523 (53)  C BE405260At02P016F01F07F1_066.ab1   (45)   523     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  262 nodes

 133 str. conn. components

Path
    1  C BE405260At02P016F01F07F1_066.ab1   568 
  101    BE405260At02P016F01F07R1_066.ab1    56 
  105  C BE405260At02P016F01F07F1_066.ab1   464 
  109    BE405260At02P016F01F07R1_066.ab1    64 
  129  C BE405260At02P016F01F07F1_066.ab1   440 
  133    BE405260At02P016F01F07R1_066.ab1    88 
  149  C BE405260At02P016F01F07F1_066.ab1   420 
  157    BE405260At02P016F01F07R1_066.ab1   112 
  181  C BE405260At02P016F01F07F1_066.ab1   388 
  205    BE405260At02P016F01F07R1_066.ab1   160 
  241  C BE405260At02P016F01F07F1_066.ab1   328 
  441    BE405260At02P016F01F07R1_066.ab1   396 
  489  C BE405260At02P016F01F07F1_066.ab1    80 
  521    BE405260At02P016F01F07R1_066.ab1   476 
Contig length: old 621, new 621

Contig length: old 621, new 621
New start: 0