No. words: 1352; after pruning: 1326


Histogram of relative pair offsets, for read pairs with multiple alignments:
32     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.0 (1,1:635)  585  1.11 0.16 0.16  BE405348As02P129H01P129H071F1_026.ab1        5   636 (42)  C BE405348As02P129H01P129H071R1_026.ab1   (42)   632     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C BE405348As02P129H01P129H071R1_026.ab1   674 
   46    BE405348As02P129H01P129H071F1_026.ab1     8 
   54  C BE405348As02P129H01P129H071R1_026.ab1   621 
   63    BE405348As02P129H01P129H071F1_026.ab1    24 
   91  C BE405348As02P129H01P129H071R1_026.ab1   584 
   99    BE405348As02P129H01P129H071F1_026.ab1    60 
  393  C BE405348As02P129H01P129H071R1_026.ab1   282 
  651    BE405348As02P129H01P129H071F1_026.ab1   612 
Contig length: old 716, new 717

Contig length: old 717, new 717
New start: 0 
S Change at: 643; seg lengths: entry 1, contig 1