No. words: 1284; after pruning: 1258


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:483)  457  0.21 0.41 0.00  BE405348Ld05P129H01P129H071F1_083.ab1        1   483 (155)  C BE405348Ld05P129H01P129H071R1_083.ab1   (161)   485     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C BE405348Ld05P129H01P129H071R1_083.ab1   646 
  190    BE405348Ld05P129H01P129H071F1_083.ab1    28 
  194  C BE405348Ld05P129H01P129H071R1_083.ab1   453 
  198    BE405348Ld05P129H01P129H071F1_083.ab1    36 
  202  C BE405348Ld05P129H01P129H071R1_083.ab1   445 
  218    BE405348Ld05P129H01P129H071F1_083.ab1    56 
  238  C BE405348Ld05P129H01P129H071R1_083.ab1   409 
  254    BE405348Ld05P129H01P129H071F1_083.ab1    92 
  262  C BE405348Ld05P129H01P129H071R1_083.ab1   385 
  266    BE405348Ld05P129H01P129H071F1_083.ab1   104 
  274  C BE405348Ld05P129H01P129H071R1_083.ab1   373 
  286    BE405348Ld05P129H01P129H071F1_083.ab1   124 
  294  C BE405348Ld05P129H01P129H071R1_083.ab1   353 
  298    BE405348Ld05P129H01P129H071F1_083.ab1   136 
  310  C BE405348Ld05P129H01P129H071R1_083.ab1   337 
  314    BE405348Ld05P129H01P129H071F1_083.ab1   152 
  318  C BE405348Ld05P129H01P129H071R1_083.ab1   329 
  354    BE405348Ld05P129H01P129H071F1_083.ab1   192 
  362  C BE405348Ld05P129H01P129H071R1_083.ab1   285 
  374    BE405348Ld05P129H01P129H071F1_083.ab1   212 
  378  C BE405348Ld05P129H01P129H071R1_083.ab1   269 
  386    BE405348Ld05P129H01P129H071F1_083.ab1   224 
  402  C BE405348Ld05P129H01P129H071R1_083.ab1   245 
  414    BE405348Ld05P129H01P129H071F1_083.ab1   252 
  478  C BE405348Ld05P129H01P129H071R1_083.ab1   169 
  482    BE405348Ld05P129H01P129H071F1_083.ab1   320 
  486  C BE405348Ld05P129H01P129H071R1_083.ab1   161 
  494    BE405348Ld05P129H01P129H071F1_083.ab1   332 
  518  C BE405348Ld05P129H01P129H071R1_083.ab1   129 
  534    BE405348Ld05P129H01P129H071F1_083.ab1   372 
  538  C BE405348Ld05P129H01P129H071R1_083.ab1   109 
  542    BE405348Ld05P129H01P129H071F1_083.ab1   380 
  550  C BE405348Ld05P129H01P129H071R1_083.ab1    97 
  554    BE405348Ld05P129H01P129H071F1_083.ab1   392 
  558  C BE405348Ld05P129H01P129H071R1_083.ab1    89 
  562    BE405348Ld05P129H01P129H071F1_083.ab1   400 
  570  C BE405348Ld05P129H01P129H071R1_083.ab1    77 
  582    BE405348Ld05P129H01P129H071F1_083.ab1   420 
  614  C BE405348Ld05P129H01P129H071R1_083.ab1    32 
  618    BE405348Ld05P129H01P129H071F1_083.ab1   456 
Contig length: old 800, new 800

Contig length: old 800, new 800
New start: 0