No. words: 1293; after pruning: 1267


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 8.6 (1,1:483)  453  0.84 0.00 0.00  BE405348Ld06P129H01P129H071F1_096.ab1        6   484 (179)  C BE405348Ld06P129H01P129H071R1_096.ab1   (151)   479     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BE405348Ld06P129H01P129H071R1_096.ab1   630 
  220    BE405348Ld06P129H01P129H071F1_096.ab1    74 
  224  C BE405348Ld06P129H01P129H071R1_096.ab1   407 
  232    BE405348Ld06P129H01P129H071F1_096.ab1    86 
  236  C BE405348Ld06P129H01P129H071R1_096.ab1   395 
  252    BE405348Ld06P129H01P129H071F1_096.ab1   106 
  256  C BE405348Ld06P129H01P129H071R1_096.ab1   375 
  276    BE405348Ld06P129H01P129H071F1_096.ab1   130 
  280  C BE405348Ld06P129H01P129H071R1_096.ab1   351 
  296    BE405348Ld06P129H01P129H071F1_096.ab1   150 
  300  C BE405348Ld06P129H01P129H071R1_096.ab1   331 
  316    BE405348Ld06P129H01P129H071F1_096.ab1   170 
  320  C BE405348Ld06P129H01P129H071R1_096.ab1   311 
  324    BE405348Ld06P129H01P129H071F1_096.ab1   178 
  336  C BE405348Ld06P129H01P129H071R1_096.ab1   295 
  344    BE405348Ld06P129H01P129H071F1_096.ab1   198 
  348  C BE405348Ld06P129H01P129H071R1_096.ab1   283 
  364    BE405348Ld06P129H01P129H071F1_096.ab1   218 
  388  C BE405348Ld06P129H01P129H071R1_096.ab1   243 
  400    BE405348Ld06P129H01P129H071F1_096.ab1   254 
  452  C BE405348Ld06P129H01P129H071R1_096.ab1   179 
  456    BE405348Ld06P129H01P129H071F1_096.ab1   310 
  476  C BE405348Ld06P129H01P129H071R1_096.ab1   155 
  484    BE405348Ld06P129H01P129H071F1_096.ab1   338 
  492  C BE405348Ld06P129H01P129H071R1_096.ab1   139 
  500    BE405348Ld06P129H01P129H071F1_096.ab1   354 
  508  C BE405348Ld06P129H01P129H071R1_096.ab1   123 
  520    BE405348Ld06P129H01P129H071F1_096.ab1   374 
Contig length: old 809, new 809

Contig length: old 809, new 809
New start: 0