No. words: 1296; after pruning: 1270


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.0 (1,1:487)  455  1.02 0.20 0.00  BE405348Ld09P129H01P129H071F1_090.ab1        1   488 (178)  C BE405348Ld09P129H01P129H071R1_090.ab1   (141)   489     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BE405348Ld09P129H01P129H071R1_090.ab1   630 
  224    BE405348Ld09P129H01P129H071F1_090.ab1    82 
  228  C BE405348Ld09P129H01P129H071R1_090.ab1   403 
  252    BE405348Ld09P129H01P129H071F1_090.ab1   110 
  264  C BE405348Ld09P129H01P129H071R1_090.ab1   367 
  268    BE405348Ld09P129H01P129H071F1_090.ab1   126 
  284  C BE405348Ld09P129H01P129H071R1_090.ab1   347 
  296    BE405348Ld09P129H01P129H071F1_090.ab1   154 
  304  C BE405348Ld09P129H01P129H071R1_090.ab1   327 
  312    BE405348Ld09P129H01P129H071F1_090.ab1   170 
  336  C BE405348Ld09P129H01P129H071R1_090.ab1   295 
  344    BE405348Ld09P129H01P129H071F1_090.ab1   202 
  348  C BE405348Ld09P129H01P129H071R1_090.ab1   283 
  356    BE405348Ld09P129H01P129H071F1_090.ab1   214 
  364  C BE405348Ld09P129H01P129H071R1_090.ab1   267 
  372    BE405348Ld09P129H01P129H071F1_090.ab1   230 
  472  C BE405348Ld09P129H01P129H071R1_090.ab1   159 
  484    BE405348Ld09P129H01P129H071F1_090.ab1   342 
  492  C BE405348Ld09P129H01P129H071R1_090.ab1   139 
  500    BE405348Ld09P129H01P129H071F1_090.ab1   358 
  508  C BE405348Ld09P129H01P129H071R1_090.ab1   123 
  528    BE405348Ld09P129H01P129H071F1_090.ab1   386 
Contig length: old 808, new 808

Contig length: old 808, new 808
New start: 0