No. words: 1279; after pruning: 1253


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:474)  450  0.42 0.21 0.00  BE405348Ld12P129H01P129H071F1_084.ab1        1   475 (176)  C BE405348Ld12P129H01P129H071R1_084.ab1   (152)   476     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BE405348Ld12P129H01P129H071R1_084.ab1   628 
  178    BE405348Ld12P129H01P129H071F1_084.ab1    25 
  182  C BE405348Ld12P129H01P129H071R1_084.ab1   447 
  206    BE405348Ld12P129H01P129H071F1_084.ab1    53 
  210  C BE405348Ld12P129H01P129H071R1_084.ab1   419 
  218    BE405348Ld12P129H01P129H071F1_084.ab1    65 
  222  C BE405348Ld12P129H01P129H071R1_084.ab1   407 
  238    BE405348Ld12P129H01P129H071F1_084.ab1    85 
  242  C BE405348Ld12P129H01P129H071R1_084.ab1   387 
  250    BE405348Ld12P129H01P129H071F1_084.ab1    97 
  258  C BE405348Ld12P129H01P129H071R1_084.ab1   371 
  266    BE405348Ld12P129H01P129H071F1_084.ab1   113 
  278  C BE405348Ld12P129H01P129H071R1_084.ab1   351 
  286    BE405348Ld12P129H01P129H071F1_084.ab1   133 
  306  C BE405348Ld12P129H01P129H071R1_084.ab1   323 
  314    BE405348Ld12P129H01P129H071F1_084.ab1   161 
  334  C BE405348Ld12P129H01P129H071R1_084.ab1   295 
  342    BE405348Ld12P129H01P129H071F1_084.ab1   189 
  470  C BE405348Ld12P129H01P129H071R1_084.ab1   159 
  482    BE405348Ld12P129H01P129H071F1_084.ab1   329 
  490  C BE405348Ld12P129H01P129H071R1_084.ab1   139 
  494    BE405348Ld12P129H01P129H071F1_084.ab1   341 
  506  C BE405348Ld12P129H01P129H071R1_084.ab1   123 
  526    BE405348Ld12P129H01P129H071F1_084.ab1   373 
  534  C BE405348Ld12P129H01P129H071R1_084.ab1    95 
  538    BE405348Ld12P129H01P129H071F1_084.ab1   385 
Contig length: old 804, new 804

Contig length: old 804, new 804
New start: 0