No. words: 1694; after pruning: 1668


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 15.1 (1,1:942)  726  0.00 0.13 0.00  BE405496Ld02P103H01P103H071F1_034.ab1      101   847 (0)  C BE405496Ld02P103H01P103H071R1_034.ab1   (3)   844    97 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  372 nodes

 188 str. conn. components

Path
    1    BE405496Ld02P103H01P103H071F1_034.ab1     1 
  404  C BE405496Ld02P103H01P103H071R1_034.ab1   540 
  412    BE405496Ld02P103H01P103H071F1_034.ab1   412 
  504  C BE405496Ld02P103H01P103H071R1_034.ab1   440 
Contig length: old 943, new 943

Contig length: old 943, new 943
New start: 0