No. words: 1689; after pruning: 1663


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.1 (1,1:965)  706  0.00 0.00 0.00  BE405496Ld04P103H01P103H071F1_065.ab1      121   843 (0)  C BE405496Ld04P103H01P103H071R1_065.ab1   (0)   846   124 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  364 nodes

 184 str. conn. components

Path
    1    BE405496Ld04P103H01P103H071F1_065.ab1     1 
  448  C BE405496Ld04P103H01P103H071R1_065.ab1   519 
  452    BE405496Ld04P103H01P103H071F1_065.ab1   452 
  508  C BE405496Ld04P103H01P103H071R1_065.ab1   459 
Contig length: old 966, new 966

Contig length: old 966, new 966
New start: 0