No. words: 470; after pruning: 444


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.9 (1,1:180)  177  0.00 0.55 0.00  BE405496Ta15P088B02P095G121F1_059.ab1        1   181 (48)  C BE405496Ta15P088B02P095G121R1_059.ab1   (59)   182     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  90 nodes

 47 str. conn. components

Path
    1  C BE405496Ta15P088B02P095G121R1_059.ab1   241 
   94    BE405496Ta15P088B02P095G121F1_059.ab1    34 
  106  C BE405496Ta15P088B02P095G121R1_059.ab1   136 
  134    BE405496Ta15P088B02P095G121F1_059.ab1    74 
  138  C BE405496Ta15P088B02P095G121R1_059.ab1   104 
  142    BE405496Ta15P088B02P095G121F1_059.ab1    82 
  146  C BE405496Ta15P088B02P095G121R1_059.ab1    96 
  162    BE405496Ta15P088B02P095G121F1_059.ab1   102 
  166  C BE405496Ta15P088B02P095G121R1_059.ab1    76 
  190    BE405496Ta15P088B02P095G121F1_059.ab1   130 
  198  C BE405496Ta15P088B02P095G121R1_059.ab1    44 
  206    BE405496Ta15P088B02P095G121F1_059.ab1   146 
Contig length: old 289, new 289

Contig length: old 289, new 289
New start: 0