No. words: 1247; after pruning: 1208


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:366)  366  0.00 0.00 0.00  BE405496Tu01P016H01H07F1_015.ab1        1   367 (42)  C BE405496Tu01P016H01H07R1_015.ab1   (52)   367     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    1    1
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C BE405496Tu01P016H01H07R1_015.ab1   419 
   84    BE405496Tu01P016H01H07F1_015.ab1    32 
   96  C BE405496Tu01P016H01H07R1_015.ab1   324 
  108    BE405496Tu01P016H01H07F1_015.ab1    56 
  116  C BE405496Tu01P016H01H07R1_015.ab1   304 
  124    BE405496Tu01P016H01H07F1_015.ab1    72 
  128  C BE405496Tu01P016H01H07R1_015.ab1   292 
  244    BE405496Tu01P016H01H07F1_015.ab1   192 
Contig length: old 461, new 461

Contig length: old 461, new 461
New start: 0