No. words: 1495; after pruning: 1469


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.9 (1,1:957)  529  0.00 0.00 0.00  BE405599As01P003A02P003A081F1_057.ab1      186   722 (0)  C BE405599As01P003A02P003A081R1_057.ab1   (0)   773   237 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1    BE405599As01P003A02P003A081F1_057.ab1     1 
  290  C BE405599As01P003A02P003A081R1_057.ab1   669 
  298    BE405599As01P003A02P003A081F1_057.ab1   298 
  370  C BE405599As01P003A02P003A081R1_057.ab1   589 
  374    BE405599As01P003A02P003A081F1_057.ab1   374 
  398  C BE405599As01P003A02P003A081R1_057.ab1   561 
  418    BE405599As01P003A02P003A081F1_057.ab1   418 
  434  C BE405599As01P003A02P003A081R1_057.ab1   525 
  462    BE405599As01P003A02P003A081F1_057.ab1   462 
  474  C BE405599As01P003A02P003A081R1_057.ab1   485 
  514    BE405599As01P003A02P003A081F1_057.ab1   514 
  522  C BE405599As01P003A02P003A081R1_057.ab1   437 
Contig length: old 958, new 958

Contig length: old 958, new 958
New start: 0