No. words: 1562; after pruning: 1536


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.4 (1,1:959)  592  0.00 0.00 0.00  BE405599Ld05P003A02P003A081F1_007.ab1      178   779 (0)  C BE405599Ld05P003A02P003A081R1_007.ab1   (0)   783   182 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1    BE405599Ld05P003A02P003A081F1_007.ab1     1 
  409  C BE405599Ld05P003A02P003A081R1_007.ab1   552 
  417    BE405599Ld05P003A02P003A081F1_007.ab1   417 
  433  C BE405599Ld05P003A02P003A081R1_007.ab1   528 
  449    BE405599Ld05P003A02P003A081F1_007.ab1   449 
  461  C BE405599Ld05P003A02P003A081R1_007.ab1   500 
  529    BE405599Ld05P003A02P003A081F1_007.ab1   529 
  533  C BE405599Ld05P003A02P003A081R1_007.ab1   428 
Contig length: old 960, new 960

Contig length: old 960, new 960
New start: 0