No. words: 1450; after pruning: 1424


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.6 (1,1:928)  512  0.00 0.00 0.00  BE405599Ld08P003A02P003A081F1_001.ab1      226   746 (0)  C BE405599Ld08P003A02P003A081R1_001.ab1   (0)   704   184 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  262 nodes

 133 str. conn. components

Path
    1    BE405599Ld08P003A02P003A081F1_001.ab1     1 
  390  C BE405599Ld08P003A02P003A081R1_001.ab1   540 
  402    BE405599Ld08P003A02P003A081F1_001.ab1   402 
  414  C BE405599Ld08P003A02P003A081R1_001.ab1   516 
  434    BE405599Ld08P003A02P003A081F1_001.ab1   434 
  438  C BE405599Ld08P003A02P003A081R1_001.ab1   492 
  490    BE405599Ld08P003A02P003A081F1_001.ab1   490 
  498  C BE405599Ld08P003A02P003A081R1_001.ab1   432 
  506    BE405599Ld08P003A02P003A081F1_001.ab1   506 
  510  C BE405599Ld08P003A02P003A081R1_001.ab1   420 
Contig length: old 929, new 929

Contig length: old 929, new 929
New start: 0