No. words: 1110; after pruning: 1084


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (1,1:691)  400  0.48 0.00 0.00  BE406461As01P067B03P067B091F1_003.ab1      138   555 (0)  C BE406461As01P067B03P067B091R1_003.ab1   (0)   555   138 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  206 nodes

 105 str. conn. components

Path
    1    BE406461As01P067B03P067B091F1_003.ab1     1 
  146  C BE406461As01P067B03P067B091R1_003.ab1   547 
  154    BE406461As01P067B03P067B091F1_003.ab1   154 
  162  C BE406461As01P067B03P067B091R1_003.ab1   531 
  166    BE406461As01P067B03P067B091F1_003.ab1   166 
  190  C BE406461As01P067B03P067B091R1_003.ab1   503 
  198    BE406461As01P067B03P067B091F1_003.ab1   198 
  206  C BE406461As01P067B03P067B091R1_003.ab1   487 
  218    BE406461As01P067B03P067B091F1_003.ab1   218 
  234  C BE406461As01P067B03P067B091R1_003.ab1   459 
  243    BE406461As01P067B03P067B091F1_003.ab1   243 
  315  C BE406461As01P067B03P067B091R1_003.ab1   378 
  327    BE406461As01P067B03P067B091F1_003.ab1   327 
  331  C BE406461As01P067B03P067B091R1_003.ab1   362 
  339    BE406461As01P067B03P067B091F1_003.ab1   339 
  343  C BE406461As01P067B03P067B091R1_003.ab1   350 
  359    BE406461As01P067B03P067B091F1_003.ab1   359 
  367  C BE406461As01P067B03P067B091R1_003.ab1   326 
  375    BE406461As01P067B03P067B091F1_003.ab1   375 
  379  C BE406461As01P067B03P067B091R1_003.ab1   314 
  387    BE406461As01P067B03P067B091F1_003.ab1   387 
  395  C BE406461As01P067B03P067B091R1_003.ab1   298 
  471    BE406461As01P067B03P067B091F1_003.ab1   471 
  475  C BE406461As01P067B03P067B091R1_003.ab1   218 
  503    BE406461As01P067B03P067B091F1_003.ab1   503 
  507  C BE406461As01P067B03P067B091R1_003.ab1   186 
  531    BE406461As01P067B03P067B091F1_003.ab1   531 
  535  C BE406461As01P067B03P067B091R1_003.ab1   158 
Contig length: old 692, new 692

Contig length: old 692, new 692
New start: 0 
S Change at: 142; seg lengths: entry 1, contig 1