No. words: 1068; after pruning: 1042


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 6.0 (1,1:763)  290  0.33 0.00 0.00  BE406461Ld09P067B03P067B091F1_009.ab1      269   571 (1)  C BE406461Ld09P067B03P067B091R1_009.ab1   (0)   496   194 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1    BE406461Ld09P067B03P067B091F1_009.ab1     1 
  476  C BE406461Ld09P067B03P067B091R1_009.ab1   289 
  480    BE406461Ld09P067B03P067B091F1_009.ab1   480 
  488  C BE406461Ld09P067B03P067B091R1_009.ab1   277 
  492    BE406461Ld09P067B03P067B091F1_009.ab1   492 
  520  C BE406461Ld09P067B03P067B091R1_009.ab1   245 
  524    BE406461Ld09P067B03P067B091F1_009.ab1   524 
  544  C BE406461Ld09P067B03P067B091R1_009.ab1   221 
  560    BE406461Ld09P067B03P067B091F1_009.ab1   560 
  568  C BE406461Ld09P067B03P067B091R1_009.ab1   197 
Contig length: old 764, new 764

Contig length: old 764, new 764
New start: 0