No. words: 900; after pruning: 874


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.9 (1,1:761)  132  0.72 0.00 0.00  BE406461Ld11P067B03P067B091F1_005.ab1      380   517 (0)  C BE406461Ld11P067B03P067B091R1_005.ab1   (0)   383   246 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  66 nodes

 35 str. conn. components

Path
    1    BE406461Ld11P067B03P067B091F1_005.ab1     1 
  419  C BE406461Ld11P067B03P067B091R1_005.ab1   344 
  423    BE406461Ld11P067B03P067B091F1_005.ab1   423 
  450  C BE406461Ld11P067B03P067B091R1_005.ab1   313 
  454    BE406461Ld11P067B03P067B091F1_005.ab1   454 
  470  C BE406461Ld11P067B03P067B091R1_005.ab1   293 
  482    BE406461Ld11P067B03P067B091F1_005.ab1   482 
  498  C BE406461Ld11P067B03P067B091R1_005.ab1   265 
Contig length: old 762, new 762

Contig length: old 762, new 762
New start: 0