No. words: 1087; after pruning: 1061


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.7 (1,1:769)  298  0.63 0.32 0.00  BE406461Ld12P067B03P067B091F1_003.ab1      254   569 (0)  C BE406461Ld12P067B03P067B091R1_003.ab1   (0)   518   202 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1    BE406461Ld12P067B03P067B091F1_003.ab1     1 
  390  C BE406461Ld12P067B03P067B091R1_003.ab1   382 
  406    BE406461Ld12P067B03P067B091F1_003.ab1   406 
  410  C BE406461Ld12P067B03P067B091R1_003.ab1   362 
  414    BE406461Ld12P067B03P067B091F1_003.ab1   414 
  430  C BE406461Ld12P067B03P067B091R1_003.ab1   342 
  438    BE406461Ld12P067B03P067B091F1_003.ab1   438 
  446  C BE406461Ld12P067B03P067B091R1_003.ab1   326 
  462    BE406461Ld12P067B03P067B091F1_003.ab1   462 
  474  C BE406461Ld12P067B03P067B091R1_003.ab1   298 
  538    BE406461Ld12P067B03P067B091F1_003.ab1   537 
  542  C BE406461Ld12P067B03P067B091R1_003.ab1   230 
  562    BE406461Ld12P067B03P067B091F1_003.ab1   561 
  566  C BE406461Ld12P067B03P067B091R1_003.ab1   206 
Contig length: old 770, new 771

Contig length: old 771, new 771
New start: 0