No. words: 1636; after pruning: 1597


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.0 (1,1:497)  482  0.00 0.00 0.40  BE406587Tu02P016B02B08F1_045.ab1        1   499 (43)  C BE406587Tu02P016B02B08R1_045.scf.scf   (50)   497     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    1    1
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE406587Tu02P016B02B08R1_045.scf.scf   547 
  502    BE406587Tu02P016B02B08F1_045.ab1   452 
  514  C BE406587Tu02P016B02B08R1_045.scf.scf    35 
  534    BE406587Tu02P016B02B08F1_045.ab1   484 
Contig length: old 591, new 592

Contig length: old 592, new 592
New start: 0