No. words: 1210; after pruning: 1184


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.8 (1,1:443)  438  0.00 0.23 0.00  BE422511Ld05P067C01P067C071F1_057.ab1        1   443 (177)  C BE422511Ld05P067C01P067C071R1_057.ab1   (145)   445     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C BE422511Ld05P067C01P067C071R1_057.ab1   590 
  200    BE422511Ld05P067C01P067C071F1_057.ab1    54 
  204  C BE422511Ld05P067C01P067C071R1_057.ab1   387 
  420    BE422511Ld05P067C01P067C071F1_057.ab1   274 
Contig length: old 766, new 766

Contig length: old 766, new 766
New start: 0