No. words: 1252; after pruning: 1226


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.8 (1,1:1026)  207  0.89 0.44 0.44  BE422954Ta18P068C06P019A101F1_049.ab1      386   610 (0)  C BE422954Ta18P068C06P019A101R1_049.ab1   (0)   642   418 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  104 nodes

 54 str. conn. components

Path
    1    BE422954Ta18P068C06P019A101F1_049.ab1     1 
  485  C BE422954Ta18P068C06P019A101R1_049.ab1   543 
  493    BE422954Ta18P068C06P019A101F1_049.ab1   493 
  501  C BE422954Ta18P068C06P019A101R1_049.ab1   527 
  509    BE422954Ta18P068C06P019A101F1_049.ab1   509 
  513  C BE422954Ta18P068C06P019A101R1_049.ab1   515 
  521    BE422954Ta18P068C06P019A101F1_049.ab1   521 
  529  C BE422954Ta18P068C06P019A101R1_049.ab1   499 
Contig length: old 1027, new 1027

Contig length: old 1027, new 1027
New start: 0